PanCan-scEditome

Pan-Cancer single-Cell Editome Database

Welcome to PanCan-scEditome, an interactive analysis platform and database dedicated to the single-cell and long-read RNA editing landscape across human cancers.

PanCan-scEditome integrates long-read sequencing and single-cell RNA sequencing to provide a high-resolution, pan-cancer atlas of RNA editing events. By leveraging the unique structural properties of long-read data, we perform de novo identification of editing sites without requiring matched genomic DNA, and project these profiles across large cell populations. Through a standardized analytical framework, users can easily browse, search, and perform customized analyses.

Cancer Type Overview

Data Overview

35 Cancer Types
30 Cell Types
1,099 Total Samples
scSR
729 Samples
scLR
18 Samples
bulk LR
352 Samples
3,197,301 Cells
1,466,202 Non-redundant RNA editing sites